Organocatalysis

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Image:Liebig oxamid synthese erste organokat Reaktion.png
Justus von Liebig's synthesis of oxamide from dicyan and water represents the first organocatalytic reaction, with acetaldehyde further identified as the first discovered pure "organocatalyst", which act similarly to the then-named "ferments", now known as enzymes. [1][1]

In organic chemistry, the term Organocatalysis (a concatenation of the terms "organic" and "catalyst") refers to a form of catalysis, whereby the rate of a chemical reaction is increased by an organic catalyst referred to as an "organocatalyst" consiting of carbon, hydrogen, sulfur and other nonmetal elements found in organic compounds [1] [1] [1] [1]. Because of their similarity in composition and description, they are often mistaken as a misnomer for enzymes due to their comparable effects on reaction rates and forms of catalysis involved.

The term "organocatalysis" was created by David MacMillan in 2000 from the old and well known concept of "organic catalysis" introduced by the German chemist Wolfgang Langenbeck; "organocatalysis" is nothing more than a new name for an old methodology, but thus gives fresh impulses for intensive research in the following years.

Organocatalysts which display secondary amine functionality can be described as performing either enamine catalysis (by forming catalytic quantities of an active enamine nucleophile) or iminium catalysis (by forming catalytic quantities of an activated iminium electrophile). This mechanism is typical for covalent organocatalysis. Covalent binding of substrate normally requires high catalyst loading (for proline-catalysis typically 20-30 mol%). Noncovalent interactions such as hydrogen-bonding facilitates low catalyst loadings (down to 0.001 mol%).

Two main advantages of organocatalysis are:

Imidazolidinone organocatalysis

A certain class of imidazolidinone compounds (also called McMillan catalysts) are suitable catalysts for asymmetric Diels-Alder reactions. The original such compound was derived from the biomolecule phenylalanine in two chemical steps (amidation with methylamine followed by condensation reaction with acetone) which leave the chirality intact [1]:

Image:McMillanCatalystSynthesis.png

For an example of its use: see Asymmetric DA reactions

Thiourea organocatalysis

In nature noncovalent interactions such as hydrogen bonding ("partial protonation") play a crucial role in enzyme catalysis that is characterized by selective substrate recognition (molecular recognition), substrate activation, and enormous acceleration of organic tranformations. Based on the pioneering exmaninations by Kelly, Etter, Jorgensen, Hine, Curran, Göbel, and De Mendoza (see review articles cited below) on hydrogen bonding interactions of small, metal-free compounds with electron-rich binding sites Schreiner and co-workers peformed series of theoretical and experimental systematic investigations towards the hydrogen-bonding ability of various thiourea derivatives [1] [1] [1] [1] [1] [1] [1] [1] [1] [1] [1] [1] [1] [1]. This purely organic compounds revealed effective acceleration of simple Diels-Alder reaction, act like weak Lewis acid catalyst, but act through explicit double hydrogen bonding instead of covalent binding known from traditional metal-ion mediated catalysis. Schreiner and co-workers identified and indroduced electron-poor thiourea derivatives as hydrogen-bonding organocatalysts. N,N'-bis[[3,5-bis(trifluormethyl)phenyl thiourea is to date the most effective achiral thiourea derivative and combines all typical structural features for double H-bonding mediated organocatalysis:

Advantages of thiourea derivatives:

  • no product inhibition due to weak enthalpic binding, but specific binding-“recognition“
  • low catalyst-loading (down to 0.001 mol%)[citation needed]
  • high TOF values (up to 2,000 h–1)[citation needed]
  • simple and inexpensive synthesis
  • easily to modulate and to handle, no inert atmosphere necessary
  • immobilization on solid phase (polymer-bound organocatalysts), catalyst recovery and reusability
  • catalysis under almost neutral conditions (pka thiourea 21.0), acid-sensitive substrates are tolerated
  • metal-free, not toxic (compare traditional metal-containing Lewis-acid catalysts
  • water-tolerant, even catalytically effective in water or aqueous media
  • environmentally benign ("Green Chemistry")

To date various organic transformations are organocatalyzed through hydrogen-bonding N,N'-bis[[3,5-bis(trifluormethyl)phenyl thiourea at low catalyst loadings and in good to excellent product yields. This electron-poor thiourea derivative has proven to be the benchmark for noncovalent organocatalysis utilizing explicit hydrogen-bonding as well as to be the basis for development of a wide range of catalytically active derivatives.

Thiourea functionalized organocatalysts

Since 2001 research groups world-wide (e.g., Berkessel, Connon, Jacobsen, Nagaswa, Takemoto) have realized the potential of thiourea derivatives and developed various achiral/chiral mono- and bifunctional derivatives incorporating the electron-poor 3,5-bis(trifluoromethyl)phenyl substrate-"anchor" functionality. Meanwhile a broad spectrum of organic transformations are performed through hydrogen-bonding organocatalysis and the research ist still in the focus of interest.

Image:Wikipedia jacobsen2 polymer thiourea.png
1998: Jacobsen's chiral (polymer-bound) Schiff base thiourea derivative for asymmetric Strecker reactions. J. Am. Chem. Soc. 1998, 120, 4901-4902; Angew. Chem. Int. Ed. 2000, 39, 1279-1281
Image:ThioureaT1coor.png
2001: Schreiner's N,N'-bis[3,5-bis(trifluoromethyl)phenyl thiourea: complexation of substrate through explicit double hydrogen-bonding, clamplike binding motif. [1], [2], Org. Lett. 2002, 4, 217-220; Chem. Eur. J. 2003, 9, 407-414
Image:Wikipedia Takemoto2.png
2003: Takemoto's bifunctional chiral thiourea derivative, catalysis of asymmetric Michael- and Aza-Henry reactions. J. Am. Chem. Soc. 2003, 125, 12672-12673
Image:Wikipedia Nagasawa2.png
2004: Nagasawa's chiral bis-thiourea organocatalyst, catalysis of asymmetric Baylis-Hillman reactions. Tetrahedron Letters 2004, 45, 5589–5592
Image:Wikipedia Nagasawa guanidine.png
2005: Nagasawa's bifunctional thiourea functionalized guanidine , asymmetric catalysis of Henry(Nitroaldol)reactions. Adv. Synth. Catal. 2005, 347, 1643–1648
Image:Wikipedia Ricci alcohol thiourea.png
2005: Ricci's chiral thiourea derivative with additional hydroxy-group, enantioselective Friedel-Crafts alkylation of indols with nitroalkenes. Angew. Chem. Int. Ed. 2005, 44, 6576–6579
Image:Wang binapthol thioharnstoff.png
2005: Wei Wang's bifunctional binaphthyl-thiourea derivative, asymmetric catalysis of Morita-Baylis-Hillman reactions. Org. Lett. 2005, 7, 4293-4296
Image:Wikipedia Connon2 alkaloid thioharnstoff.png
2005: Connon's bifunctional thiourea funtionalized Cinchona alkaloid, asymmetric additions of malonates to nitroalkenes. Angew. Chem. Int. Ed. 2005, 44, 6367–6370
Image:Wikipedia Yong Tang pyrrolidine Thioharnstoff.png
2006: Yong Tang's chiral bifunctional pyrrolidine-thiourea, enantioselective Michael additions of cyclohexanone to nitroolefins. Org. Lett. 2006, 8, 2901-2904
Image:Wikipedia berkessel bisthioharnstoff.png
2006: Berkessel's chiral isophoronediamine-derived bisthiourea derivative, catalysis of asymmetric Morita-Baylis-Hillman reactions. Org. Lett. 2006, 8, 4195-4198
Image:Wikipedia Takemoto polymer thiourea.png
2006: Takemoto's PEG-bound chiral thiourea, asymmetric catalysis of (tandem-) Michael reactions of trans-ß-nitrostyrene, aza-Henry reactions. Synthesis 2006, 19 ,3295-3300
Image:Wikipedia kotke polymer thiourea.png
2007: Kotke/Schreiner, polystyrene-bound, recoverable and reusable thiourea derivative for organocatalytic tetrahydropyranylation of alcohols. Synthesis 2007, 5, 779-790
Image:Wikipedia wanka adamantane thiourea.png
2007: Wanka/Schreiner, chiral peptidic adamantane-based thiourea, catalysis of Morita-Baylis-Hillman reactions. Eur. J. Org. Chem. 2007, 1474-1490
Image:Takemoto bifunctional hydroxy thiourea.png
2007: Takemoto's chelating bifunctional hydroxy-thiourea for enantioselective Petasis-type reaction of quinolines. J. Am. Chem. Soc. 2007, 129, 6686-6687

References

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Acknowledgement and Attribution Regarding Sources of Content

Some of the initial content on this page may be incorporated in part from copyleft sources in the public domain including wikis such as Wikipedia and AskDrWiki. Drug information for patients came from the The National Library of Medicine. Infectious disease information may have come from the Centers for Disease Control (CDC). Differential Diagnoses are drawn from clinicians as well as an amalgamation of 3 sources: 1.The Disease Database; 2. Kahan, Scott, Smith, Ellen G. In A Page: Signs and Symptoms. Malden, Massachusetts: Blackwell Publishing, 2004:3; 3. Sailer, Christian, Wasner, Susanne. Differential Diagnosis Pocket. Hermosa Beach, CA: Borm Bruckmeir Publishing LLC, 2002:7 .

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